Latest re-run of the pipeline

Wow. A lot of errors this time around. bash: /scratch/adam_work/l020/l020_fitslist.txt: Permission deniedMRDFITS: Image array (1634,560)  Type=Real*4% HEULER: FITS header is already in Galactic: nothing changed% READFITS:  ERROR - Unable to locate file            060628_o32_raw_ds5.nc_indiv13pca_map01.fits% Variable is undefined: HDIMAGE.% Execution halted at: IMAGE_SHIFTS       44  /home/milkyway/student/ginsbura/bgps_pipeline/alignment/image_shifts.pro%                      COALIGN_FIELD      31  /home/milkyway/student/ginsbura/bgps_pipeline/wrappers/coalign_field.pro%                      $MAIN$          Updated radec_offsets in /scratch/sliced_polychrome/l034/050708_o21_raw_ds5.ncWriting offsets to   -0.00192975 -9.22609e-09 (ncfile was -0.000337092)% ALIGNMENT_OFFSETS_TO_NCDF: Could not find file % Execution halted at: ALIGNMENT_OFFSETS_TO_NCDF    4  /home/milkyway/student/ginsbura/bgps_pipeline/preproc/alignment_offsets_to_  ncdf.pro%                      WRITE_IMSHIFTS     11  /home/milkyway/student/ginsbura/bgps_pipeline/alignment/write_imshifts.pro%                      COALIGN_FIELD      34  /home/milkyway/student/ginsbura/bgps_pipeline/wrappers/coalign_field.pro%                      IMAGE_SHIFTS       44  /home/milkyway/student/ginsbura/bgps_pipeline/alignment/image_shifts.pro%                      COALIGN_FIELD      31  /home/milkyway/student/ginsbura/bgps_pipeline/wrappers/coalign_field.pro%                      $MAIN$          /scratch/adam_work/l354/070709_o16_raw_ds5.nc_indiv13pca took 110.42429 sec.MRDFITS: File access error% HEULER: ERROR - First parameter must be a FITS header or astrometry          structure% Execution halted at: HEULER             78FIELD l351 COMPLETED at Sat Nov  8 05:34:01 2008.  Took 1122.3564 seconds% Program caused arithmetic error: Floating underflow% Program caused arithmetic error: Floating illegal operandFIELD l052 BEGUN at Sat Nov  8 05:34:01 2008% FILE_LINES: Error opening file.              File: /scratch/sliced/l052/l052_infile.txt  No such file or directory% Error occurred at: READCOL           141FIELD l359 COMPLETED at Sat Nov  8 05:41:34 2008.  Took 452.60051 seconds% Program caused arithmetic error: Floating underflow% Program caused arithmetic error: Floating illegal operandFIELD l066 BEGUN at Sat Nov  8 05:41:34 2008% FILE_LINES: Error opening file.              File: /scratch/sliced/l066/l066_infile.txt  No such file or directory% Error occurred at: READCOL           141FIELD l072 BEGUN at Sat Nov  8 05:41:34 2008% FILE_LINES: Error opening file.              File: /scratch/sliced/l072/l072_infile.txt  No such file or directory% Error occurred at: READCOL           141MRDFITS: Image array (628,561)  Type=Real*4% HEULER: FITS header is already in Galactic: nothing changed% HEULER: FITS header is already in Galactic: nothing changed/scratch/adam_work/l086/060627_o23_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:     -9.77712      11.8034 shifts in arcsec l/b:       70.395277       84.984804 delta-ra (as):        19.007974 delta-dec (as):       -108.70337 x/y error in pixels:       3.99631    0.0701244 ra/dec error:    -0.0079926204   0.00014024887 gal l/b error:    -0.0079926204   0.00014024887% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:       203.757    -0.224758 so a different method is being attemptedWARNING!  x,y offs were too large on the SECOND TRY too:      -74.7339     -159.448 so a third method is being attemptedThis third method is meant to deal with small overlap regions that may be confused by high noise, it restrictsto a maximum 15 pixel offset (really less than that in practice) and therefore should be checked carefully./scratch/adam_work/l086/060627_o26_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:     -1.38579      1.39157 shifts in arcsec l/b:       9.9777001       10.019338 delta-ra (as):        1.1521393 delta-dec (as):       -14.093081 x/y error in pixels:     0.0814682    0.0882818 ra/dec error:   -0.00016293635   0.00017656364 gal l/b error:   -0.00016293635   0.00017656364% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:       9.13210      11.3905 so a different method is being attemptedWARNING!  x,y offs were too large on the SECOND TRY too:      -79.0260      20.0907 so a third method is being attemptedThis third method is meant to deal with small overlap regions that may be confused by high noise, it restrictsto a maximum 15 pixel offset (really less than that in practice) and therefore should be checked carefully./scratch/adam_work/l086/070707_o49_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:     -9.13210     -11.3905 shifts in arcsec l/b:       65.751123      -82.011258 delta-ra (as):       -105.06683 delta-dec (as):        3.1919479 x/y error in pixels:      0.486307     0.950778 ra/dec error:   -0.00097261386    0.0019015568 gal l/b error:   -0.00097261386    0.0019015568% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:      0.384630      13.1890 so a different method is being attemptedWARNING!  x,y offs were too large on the SECOND TRY too:       205.434     -23.9600 so a third method is being attemptedThis third method is meant to deal with small overlap regions that may be confused by high noise, it restrictsto a maximum 15 pixel offset (really less than that in practice) and therefore should be checked carefully./scratch/adam_work/l086/070708_o37_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:    -0.384630     -13.1890 shifts in arcsec l/b:       2.7693373      -94.960636 delta-ra (as):       -74.063617 delta-dec (as):        59.509407 x/y error in pixels:       2.29135     0.933383 ra/dec error:    -0.0045826990    0.0018667649 gal l/b error:    -0.0045826990    0.0018667649% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:      -143.139      10.8130 so a different method is being attempted% Subscript range values of the form low:high must be >= 0, < size, with low  <= high: CORR.% Execution halted at: PIXSHIFT          107ALL PREPROC ... output is /scratch/adam_work/l133/070911_o25_raw_ds5.nc_indiv13pca  READING IN 1 FILES FROM /scratch/sliced/l133/070911_o25_raw_ds5.ncReading file /scratch/sliced/l133/070911_o25_raw_ds5.ncApplying pointing model with alt/az off     -0.024687220    -0.029154389NO OFFSETS APPLIED3.6277909 sec.No values flagged as bad!AC_BOLOS has 0.0 NAN points, which is 0.0 of totalFlatfielding (polynomial subtraction) ...0.92621708 sec.No values flagged as bad!AC_BOLOS has 0.0 NAN points, which is 0.0 of totalPrepare Map ... 1.4727209 sec.% CHECK_FITS: NAXIS keywords in FITS header have been updatedDone preproc ... 11.113711 sec.ITERATION NUMBER 0 ...SKY SUBTRACTION - MEDIAN0.15759706 sec.BEGINNING PCA SUBTRACTION OF COMPONENTS 0 TO 13 ... 0.68130398 sec.Flatfielding (polynomial subtraction) ...0.96450186 sec.% CHECK_FITS: NAXIS keywords in FITS header have been updated% CHECK_FITS: NAXIS keywords in FITS header have been updated% Program caused arithmetic error: Floating underflowDeconvolution iteration  0:  1.2357290 sec.Deconvolution iteration  1:  0.93198013 sec.Deconvolution iteration  2:  0.93152189 sec.Deconvolution iteration  3:  0.93164992 sec.Chi2 for iteration 0 is 1.22593e+07 with 2.07110e+06 degrees of freedomFINISHED ITERATION 0   13.803532 sec.ITERATION NUMBER 1 ...SKY SUBTRACTION - MEDIAN0.15691710 sec.BEGINNING PCA SUBTRACTION OF COMPONENTS 0 TO 13 ... % TRIQL: Too many iterations in tqli.% Error occurred at: EIGENQL           122  /usr/local/itt/idl70/lib/eigenql.pro%                    PCA_SUBTRACT       19/scratch/adam_work/l135p1/060917_o12_raw_ds5.nc_indiv13pca took 30.478553 sec.MRDFITS: File access error% HEULER: ERROR - First parameter must be a FITS header or astrometry          structure% Execution halted at: HEULER             78MRDFITS: Image array (1630,555)  Type=Real*4% HEULER: FITS header is already in Galactic: nothing changed% HEULER: FITS header is already in Galactic: nothing changed/scratch/adam_work/l068/070910_ob3_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:   -0.0271645   -0.0270424 shifts in arcsec l/b:      0.19558409     -0.19470519 delta-ra (as):      -0.26866187 delta-dec (as):     -0.062403024 x/y error in pixels:   0.000193238   0.00126581 ra/dec error:   -3.8647498e-07   2.5316247e-06 gal l/b error:   -3.8647498e-07   2.5316247e-06% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:       34.8510     -5.72119 so a different method is being attemptedWARNING!  x,y offs were too large on the SECOND TRY too:       142.704      76.4267 so a third method is being attemptedThis third method is meant to deal with small overlap regions that may be confused by high noise, it restrictsto a maximum 15 pixel offset (really less than that in practice) and therefore should be checked carefully./scratch/adam_work/l068/070911_ob8_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:      15.0101      3.42143 shifts in arcsec l/b:      -108.07276       24.634271 delta-ra (as):        78.221561 delta-dec (as):        78.545365 x/y error in pixels:     0.0114306     0.184410 ra/dec error:   -2.2861189e-05   0.00036881918 gal l/b error:   -2.2861189e-05   0.00036881918% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:       56.2296      14.6994 so a different method is being attemptedWARNING!  x,y offs were too large on the SECOND TRY too:       728.753     -184.087 so a third method is being attemptedThis third method is meant to deal with small overlap regions that may be confused by high noise, it restrictsto a maximum 15 pixel offset (really less than that in practice) and therefore should be checked carefully./scratch/adam_work/l068/070911_ob9_raw_ds5.nc_indiv13pca_map01.fits shifts in pixels:     -56.2296     -14.6994 shifts in arcsec l/b:       404.85292      -105.83592 delta-ra (as):       -304.51436 delta-dec (as):       -286.88182 x/y error in pixels:       7.32951   0.00354093 ra/dec error:     -0.014659024   7.0818565e-06 gal l/b error:     -0.014659024   7.0818565e-06% HEULER: FITS header is already in Galactic: nothing changedWARNING!  x,y offs were too large:       3.31224     -13.8321 so a different method is being attempted% Subscript range values of the form low:high must be >= 0, < size, with low  <= high: CORR.% Execution halted at: PIXSHIFT          107/scratch/adam_work/l111/060605_o48_raw_ds5.nc_indiv13pca took 10.098406 sec.MRDFITS: File access error% HEULER: ERROR - First parameter must be a FITS header or astrometry          structure% Execution halted at: HEULER             78Writing offsets to /scratch/sliced/l027/060616_o10_raw_ds5.nc   0.00120866  -0.00287235 (ncfile was 060616_o10_raw_ds5.nc)Updated radec_offsets in /scratch/sliced/l027/060616_o10_raw_ds5.ncWriting offsets to   5.77312e-05 -2.39760e-06 (ncfile was 0.000409983)% ALIGNMENT_OFFSETS_TO_NCDF: Could not find file % Execution halted at: ALIGNMENT_OFFSETS_TO_NCDF    4